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Publikacje

2022

Hałakuc, Paweł; Karnkowska, Anna; Milanowski, Rafał

Typical structure of rRNA coding genes in diplonemids points to two independent origins of the bizarre rDNA structures of euglenozoans Journal Article

BMC Ecology and Evolution, 22 (1), pp. 59, 2022, ISSN: 2730-7182.

Abstract | Links | BibTeX

Okrasińska, Alicja; Decewicz, Przemyslaw; Majchrowska, Maria; Dziewit, Lukasz; Muszewska, Anna; Dolatabadi, Somayeh; Kruszewski, Łukasz; Błocka, Zuzanna; Pawłowska, Julia

Marginal lands and fungi – linking the type of soil contamination with fungal community composition Journal Article

Environmental Microbiology, 2022.

Abstract | Links | BibTeX

Jerzy Dzik Nguyen Duc Phong, Nguyen Thi Thuy ; Swis, Przemyslaw

Evolution and migration of conodonts and ammonoids near the end of Devonian recorded in distant localities Journal Article

Stratigraphy, 19 (1), pp. 27-50, 2022.

Abstract | Links | BibTeX

Karlicki, Michał; Antonowicz, Stanisław; Karnkowska, Anna

Tiara: deep learning-based classification system for eukaryotic sequences Journal Article

Bioinformatics, 38 (2), pp. 344–350, 2022.

Abstract | Links | BibTeX

Miłobedzka, Aleksandra; Ferreira, Catarina; Vaz-Moreira, Ivone; Calderón-Franco, David; Gorecki, Adrian; Purkrtova, Sabina; Bartacek, Jan; Dziewit, Lukasz; Singleton, Caitlin M; Nielsen, Per Halkjær; Weissbrodt, David Gregory; Manaia, Célia M

Monitoring antibiotic resistance genes in wastewater environments: The challenges of filling a gap in the One-Health cycle Journal Article

Journal of Hazardous Materials, 424 , pp. 127407, 2022, ISSN: 0304-3894.

Abstract | Links | BibTeX

Chaber, Katarzyna; Łukomska-Kowalczyk, Maja; Fells, Alicja; Milanowski, Rafał; Zakryś, Bożena

Toward the robust resolution of taxonomic ambiguity within Lepocinclis (Euglenida) based on DNA sequencing and morphology Journal Article

Journal of Phycology, 58 (1), pp. 105-120, 2022.

Abstract | Links | BibTeX

Maciszewski, Kacper; Dabbagh, Nadja; Preisfeld, Angelika; Karnkowska, Anna

Maturyoshka: A maturase inside a maturase, and other peculiarities of the novel chloroplast genomes of marine euglenophytes Journal Article

Molecular Phylogenetics and Evolution, 170 , pp. 107441, 2022, ISSN: 1055-7903.

Abstract | Links | BibTeX

Grabowska-Grucza, Karolina; Bancerz-Kisiel, Agata

Comparison of Yersinia enterocolitica DNA Isolation from Swabs Without Pre-Enrichment on Selective Media With Isolation Preceded by Warm and Cold Enrichment Journal Article

Foodborne Pathogens and Disease, 2022, ISSN: 1535-3141.

Links | BibTeX

Szczupak, Patrycja; Radzikowska-Cieciura, Ewa; Kulik, Katarzyna; Madaj, Rafał; Sierant, Małgorzata; Krakowiak, Agnieszka; Nawrot, Barbara

Escherichia coli tRNA 2-selenouridine synthase SelU selects its prenyl substrate to accomplish its enzymatic function Journal Article

Bioorganic Chemistry, 122 , pp. 105739, 2022, ISSN: 00452068.

Abstract | Links | BibTeX

S., Ben Geoffrey A; Madaj, Rafal; Valluri, Pavan Preetham

QPoweredCompound2DeNovoDrugPropMax – a novel programmatic tool incorporating deep learning and in silico methods for automated in silico bio-activity discovery for any compound of interest Journal Article

Journal of Biomolecular Structure and Dynamics, pp. 1-8, 2022, ISSN: 0739-1102.

Abstract | Links | BibTeX

Latoszek, Ewelina; Wiweger, Małgorzata; Ludwiczak, Jan; Dunin-Horkawicz, Stanisław; Kuznicki, Jacek; Czeredys, Magdalena

Siah-1-interacting protein regulates mutated huntingtin protein aggregation in Huntington’s disease models Journal Article

Cell & Bioscience, 12 , pp. 34, 2022, ISSN: 2045-3701.

Abstract | Links | BibTeX

Kamiński, Kamil; Ludwiczak, Jan; Jasiński, Maciej; Bukala, Adriana; Madaj, Rafal; Szczepaniak, Krzysztof; Dunin-Horkawicz, Stanisław

Rossmann-toolbox: a deep learning-based protocol for the prediction and design of cofactor specificity in Rossmann fold proteins Journal Article

Briefings in Bioinformatics, 23 , 2022, ISSN: 1467-5463.

Abstract | Links | BibTeX

Ludwiczak, Jan; Winski, Aleksander; Dunin-Horkawicz, Stanislaw

localpdb —a Python package to manage protein structures and their annotations Journal Article

Bioinformatics, 2022, ISSN: 1367-4803.

Abstract | Links | BibTeX

 

2021

Pedro, Crous; Osieck, E R; (...) Pawłowska, Julia ; Portugal, A; (...), ; Trovão, João ; (...) Groenewald, J Z

Fungal Planet description sheets: 1284–1382 Journal Article

Persoonia, 47 , pp. 309, 2021, ISSN: 1878-9080.

Links | BibTeX

Treitli, Sebastian Cristian; Peña-Diaz, Priscila; Hałakuc, Paweł; Karnkowska, Anna; Hampl, Vladimír

High quality genome assembly of the amitochondriate eukaryote Monocercomonoides exilis Journal Article

Microbial Genomics, 7 (12), pp. 000745, 2021, ISSN: 2057-5858.

Abstract | Links | BibTeX

Leonhard, Isabella; Shirley, Bryan; Murdock, Duncan J E; Repetski, John; Jarochowska, Emilia

Growth and feeding ecology of coniform conodonts Journal Article

PeerJ, 9 , pp. e12505, 2021, ISSN: 2167-8359.

Abstract | Links | BibTeX

Soukal, Petr; Hrdá, Štěpánka; Karnkowska, Anna; Milanowski, Rafał; Szabová, Jana; Hradilová, Miluše; Strnad, Hynek; Vlček, Čestmír; Čepička, Ivan; Hampl, Vladimír

Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology Journal Article

Scientific Reports, 11 (1), pp. 13070, 2021, ISSN: 2045-2322.

Abstract | Links | BibTeX

P.W., Crous; D.A., Cowan; G., Maggs-Kölling; N., Yilmaz; R., Thangavel; M.J., Wingfield; M.E., Noordeloos; B., Dima; T.E., Brandrud; G.M., Jansen; O.V., Morozova; J., Vila; R.G., Shivas; Y.P., Tan; S., Bishop-Hurley; E., Lacey; T.S., Marney; E., Larsson; G., Le Floch; L., Lombard; P., Nodet; V., Hubka; P., Alvarado; A., Berraf-Tebbal; J.D., Reyes; G., Delgado; A., Eichmeier; J.B., Jordal; A.V., Kachalkin; A., Kubátová; J.G., Maciá-Vicente; E.F., Malysheva; V., Papp; K.C., Rajeshkumar; A., Sharma; M., Spetik; D., Szabóová; M.A., Tomashevskaya; J.A., Abad; Z.G., Abad; A.V., Alexandrova; G., Anand; F., Arenas; N., Ashtekar; S., Balashov; Á., Bañares; R., Baroncelli; I., Bera; A.Yu., Biketova; C.L., Blomquist; T., Boekhout; D., Boertmann; T.M., Bulyonkova; T.I., Burgess; A.J., Carnegie; J.F., Cobo-Diaz; G., Corriol; J.H., Cunnington; da M.O., Cruz; U., Damm; N., Davoodian; de A.L.C.M., Santiago A; J., Dearnaley; de L.W.S., Freitas; K., Dhileepan; R., Dimitrov; S., Di Piazza; S., Fatima; F., Fuljer; H., Galera; A., Ghosh; A., Giraldo; (...), Glushakova A M; M., Gorczak; D.E., Gouliamova; D., Gramaje; M., Groenewald; C.K., Gunsch; A., Gutiérrez; D., Holdom; J., Houbraken; A.B., Ismailov; Ł., Istel; T., Iturriaga; M., Jeppson; Ž., Jurjević; L.B., Kalinina; V.I., Kapitonov; I., Kautmanova; A.N., Khalid; M., Kiran; L., Kiss; Á., Kovács; D., Kurose; I., Kusan; S., Lad; T., Læssøe; H.B., Lee; J.J., Luangsa-ard; M., Lynch; A.E., Mahamedi; V.F., Malysheva; A., Mateos; N., Matočec; A., Mešić; A.N., Miller; S., Mongkolsamrit; G., Moreno; A., Morte; R., Mostowfizadeh-Ghalamfarsa; A., Naseer; A., Navarro-Ródenas; T.T.T., Nguyen; W., Noisripoom; J.E., Ntandu; J., Nuytinck; V., Ostrý; T.A., Pankratov; J., Pawłowska; J., Pecenka; T.H.G., Pham; A., Polhorský; A., Posta; D.B., Raudabaugh; K., Reschke; A., Rodríguez; M., Romero; S., Rooney-Latham; J., Roux; M., Sandoval-Denis; M.Th., Smith; T.V., Steinrucken; T.Y., Svetasheva; Z., Tkalčec; van der E.J., Linde; v.d. M., Vegte; J., Vauras; A., Verbeken; C.M., Visagie; J.S., Vitelli; S.V., Volobuev; A., Weill; M., Wrzosek; I.V., Zmitrovich; E.A., Zvyagina; J.Z., Groenewald

Fungal Planet description sheets: 1182–1283 Journal Article

Persoonia, 46 (11), pp. 313-528, 2021.

Links | BibTeX

Gorczak, Michał; Trigos-Peral, Gema

Solving a long-standing enigma: Myrmicinosporidium durum belongs to Blastocladiomycota, a phylum of primarily aquatic fungi Journal Article

Journal of Invertebrate Pathology, pp. 107640, 2021, ISSN: 0022-2011.

Links | BibTeX

Czepiński, Łukasz; Dróżdż, Dawid; Szczygielski, Tomasz; Tałanda, Mateusz; Pawlak, Wojciech; Lewczuk, Antoni; Rytel, Adam; Sulej, Tomasz

An Upper Triassic Terrestrial Vertebrate Assemblage from the Forgotten Kocury Locality (Poland) with a New Aetosaur Taxon Journal Article

Journal of Vertebrate Paleontology, pp. e1898977, 2021.

Links | BibTeX

Koczyk, Grzegorz; Pawłowska, Julia; Muszewska, Anna

Terpenoid Biosynthesis Dominates among Secondary Metabolite Clusters in Mucoromycotina Genomes Journal Article

Journal of Fungi, 7 (4), 2021, ISSN: 2309-608X.

Links | BibTeX

Gumińska, Natalia; Łukomska-Kowalczyk, Maja; Chaber, Katarzyna; Zakryś, Bożena; Milanowski, Rafał

Evaluation of V2 18S rDNA barcode marker and assessment of sample collection and DNA extraction methods for metabarcoding of autotrophic euglenids Journal Article

Environmental Microbiology, 23 (6), pp. 2992–3008 , 2021.

Abstract | Links | BibTeX

Świś, Przemysław

A new Devonian species of the enigmatic Carboniferous conodont Dollymae Journal Article

Palaeoworld, 2021, ISSN: 1871-174X.

Links | BibTeX

Gorczak, Michał; Siedlecki, Igor; Błocka, Zuzanna; Cullen, Maria; Daniele, Inita; Fox, Howard; Harder, Christoffer; Kinnunen, Juha; Kochanowski, Michał; Krisai-Greilhuber, Irmgard; Majchrowska, Maria; Meiere, Diana; Oberhofer, Martina; Schigel, Dmitry; Senn-Irlet, Beatrice; Wiktorowicz, Dorota; Wrzosek, Marta; Pawłowska, Julia

18th Congress of European Mycologists Bioblitz 2019 – Naturalists Contribute to the Knowledge of Mycobiota and Lichenobiota of Białowieża Primeval Forest Journal Article

Acta Mycologica, 55 (2), pp. 55211, 2021.

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Hohmann, Niklas

Incorporating information on varying sedimentation rates into paleontological analyses Journal Article

Palaios, 36 (2), pp. 53–67, 2021, ISSN: 1938-5323.

Abstract | Links | BibTeX

Muszewska, Anna; Okrasińska, Alicja; Steczkiewicz, Kamil; Drgas, Olga; Orłowska, Małgorzata; Perlińska-Lenart, Urszula; Aleksandrzak-Piekarczyk, Tamara; Szatraj, Katarzyna; Zielenkiewicz, Urszula; Piłsyk, Sebastian; Malc, Ewa; Mieczkowski, Piotr; Kruszewska, Joanna S; Bernat, Przemysław; Pawłowska, Julia

Metabolic Potential, Ecology and Presence of Associated Bacteria Is Reflected in Genomic Diversity of Mucoromycotina Journal Article

Frontiers in Microbiology, 12 , pp. 239, 2021.

Abstract | Links | BibTeX

Gumińska, Natalia; Zakryś, Bożena; Milanowski, Rafał

A New Type of Circular RNA derived from Nonconventional Introns in Nuclear Genes of Euglenids Journal Article

Journal of Molecular Biology, 433 (3), pp. 166758, 2021.

Abstract | Links | BibTeX

Chachuła, Piotr; Domian, Grażyna; Gierczyk, Błażej; Halama, Marek; Kałucka, Izabela; Kujawa, Anna; Ławrynowicz, Maria; Łuszczyński, Janusz; Mleczko, Piotr; Okrasińska, Alicja; Pawłowska, Julia; Piskorski, Sebastian; Ronikier, Anna; Ruszkiewicz-Michalska, Małgorzata; Rutkowski, Ryszard; Skoczek, Barbara; Stasińska, Małgorzata; Szczepkowski, Andrzej; Ślusarczyk, Dominika; Ślusarczyk, Tomasz

Grzyby chronione Polski. Rozmieszczenie, zagrożenia, rekomendacje ochronne Book

Instytut Środowiska Rolniczego i Leśnego Polskiej Akademii Nauk, Poznań, 2021, ISBN: 978-83-938379-8-4.

BibTeX

Baczyński, Jakub; Miłobędzka, Aleksandra; Banasiak, Łukasz

Morphology of pollen in Apiales (Asterids, Eudicots) Journal Article

Phytotaxa, 478 (1), pp. 001-032, 2021.

Links | BibTeX

Piwczyński, Marcin; Trzeciak, Paulina; Popa, Madalina-Oana; Pabijan, Maciej; Corral, José María; Spalik, Krzysztof; Grzywacz, Andrzej

Using RAD seq for reconstructing phylogenies of highly diverged taxa: A test using the tribe Scandiceae (Apiaceae) Journal Article

Journal of Systematics and Evolution, 59 (1), pp. 58-72, 2021.

Abstract | Links | BibTeX

Lax, G; Kolisko, M; Eglit, Y; Lee, W J; Yubuki, N; Karnkowska, A; Leander, B S; Burger, G; Keeling, P J; Simpson, A G B

Multigene phylogenetics of euglenids based on single-cell transcriptomics of diverse phagotrophs Journal Article

Molecular Phylogenetics and Evolution, 159 , pp. 107088, 2021, ISSN: 1055-7903.

Abstract | Links | BibTeX

Siedlecki, Igor; Gorczak, Michał; Okrasińska, Alicja; Wrzosek, Marta

Chance or Necessity—The Fungi Co−Occurring with Formica polyctena Ants Journal Article

Insects, 12 (3), 2021.

Links | BibTeX

Kostygov, Alexei Y; Karnkowska, Anna; Votypka, Jan; Tashyreva, Daria; Maciszewski, Kacper; Yurchenko, Vyacheslav; Lukes, Julius

Euglenozoa : taxonomy, diversity and ecology, symbioses and viruses Journal Article

Open Biology, 11 (3), pp. 200407-200407, 2021, ISBN: 0000000337.

Abstract | Links | BibTeX

Okrasińska, Alicja; Bokus, Aleksandra; Duk, Katarzyna; Gęsiorska, Aleksandra; Sokołowska, Blanka; Miłobędzka, Aleksandra; Wrzosek, Marta; Pawłowska, Julia

New Endohyphal Relationships between Mucoromycota and Burkholderiaceae Representatives Journal Article

Applied and Environmental Microbiology, 87 (7), 2021, ISSN: 0099-2240.

Abstract | Links | BibTeX

Singh, Racquel A; Boscaro, Vittorio; James, Erick R; Karnkowska, Anna; Kolisko, Martin; Gavelis, Gregory S; Okamoto, Noriko; Del Campo, Javier ; Fiorito, Rebecca; Hehenberger, Elisabeth; Irwin, Nicholas A T; Mathur, Varsha; Scheffrahn, Rudolf H; Keeling, Patrick J

Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha Journal Article

Scientific reports, 11 (1), pp. 7270, 2021, ISSN: 20452322.

Abstract | Links | BibTeX

Łukomska-Kowalczyk, Maja; Chaber, Katarzyna; Fells, Alicja; Milanowski, Rafał; Zakryś, Bożena

Description of Flexiglena gen. nov. and new members of Discoplastis and Euglenaformis (Euglenida) Journal Article

Journal of Phycology, 57 (3), pp. 766-779, 2021.

Abstract | Links | BibTeX

Frankiewicz, Kamil E; Banasiak, Łukasz; Oskolski, Alexei; Reduron, Jean-Pierre; Reyes-Betancort, Jorge Alfredo; Alsarraf, Mohammed; Trzeciak, Paulina; Spalik, Krzysztof

Long-distance dispersal events rather than growth habit and life-history traits affect diversification rate in tribe Apieae (Apiaceae) Journal Article

Botanical Journal of the Linnean Society, 2021, ISSN: 0024-4074, (boab032).

Abstract | Links | BibTeX

Dzik, Jerzy

Protaspis larva of an aglaspidid-like arthropod from the Ordovician of Siberia and its habitat Journal Article

Arthropod Structure & Development, 61 , pp. 101026, 2021, ISSN: 1467-8039.

Abstract | Links | BibTeX

Gorczak, Michał; Trigos-Peral, Gema

Solving a long-standing enigma: Myrmicinosporidium durum belongs to Blastocladiomycota, a phylum of primarily aquatic fungi Journal Article

Journal of Invertebrate Pathology, pp. 107640, 2021, ISSN: 0022-2011.

Links | BibTeX

Koczyk, Grzegorz; Pawłowska, Julia; Muszewska, Anna

Terpenoid Biosynthesis Dominates among Secondary Metabolite Clusters in Mucoromycotina Genomes Journal Article

Journal of Fungi, 7 , 2021, ISSN: 2309-608X.

Links | BibTeX

Kraatz, Brian; Belabbas, Rafik; Fostowicz-Frelik, Lucja A; Ge, Deyan; Kuznetsov, Alexander N; Lang, Madlen; Lopez-Torres, Sergi; Mohammadi, Zeinolabedin; Racicot, Rachel A; Ravosa, Matthew J; others,

Lagomorpha as a model morphological system Journal Article

Frontiers in Ecology and Evolution, 9 , pp. 366, 2021.

BibTeX

Fostowicz-Frelik, Lucja; Lopez-Torres, Sergi; Li, Qian

Tarsal morphology of ischyromyid rodents from the middle Eocene of China gives an insight into the group’s diversity in Central Asia Journal Article

Scientific reports, 11 (1), pp. 1-11, 2021.

BibTeX

Singh, Racquel A; Boscaro, Vittorio; James, Erick R; Karnkowska, Anna; Kolisko, Martin; Gavelis, Gregory S; Okamoto, Noriko; Campo, Javier Del; Fiorito, Rebecca; Hehenberger, Elisabeth; Irwin, Nicholas A T; Mathur, Varsha; Scheffrahn, Rudolf H; Keeling, Patrick J

Characterization of new cristamonad species from kalotermitid termites including a novel genus, Runanympha Journal Article

Scientific reports, 11 , pp. 7270, 2021, ISSN: 20452322.

Abstract | Links | BibTeX

Świś, Przemysław

A new Devonian species of the enigmatic Carboniferous conodont Dollymae Journal Article

Palaeoworld, 2021, ISSN: 1871-174X.

Links | BibTeX

Czepiński, Łukasz; Dróżdż, Dawid; Szczygielski, Tomasz; Tałanda, Mateusz; Pawlak, Wojciech; Lewczuk, Antoni; Rytel, Adam; Sulej, Tomasz

An Upper Triassic Terrestrial Vertebrate Assemblage from the Forgotten Kocury Locality (Poland) with a New Aetosaur Taxon Journal Article

Journal of Vertebrate Paleontology, pp. e1898977, 2021.

Links | BibTeX

Schillaci, Michael A; Sutton, Logan D; Wichmann, Søren; López-Torres, Sergi

Linguistic Clues to Kiowa-Tanoan Prehistory Journal Article

Journal of the Southwest, 63 (2), pp. 255–368, 2021.

BibTeX

Karnkowska, Anna; Treitli, Sebastian Cristian; Pen, Priscila; Hałakuc, Paweł; Karnkowska, Anna; Hampl, Vladimir

High quality genome assembly of the amitochondriate eukaryote Monocercomonoides exilis Journal Article

Microbial Genomics, 2021.

Links | BibTeX

Łaska, Weronika; Rodríguez-Tovar, Francisco J; Uchman, Alfred

Bioerosion structures from the Pliocene of the Agua Amarga Subbasin (Almería, SE Spain): Palaeoecological and palaeoenvironmental implications Journal Article

Palaeogeography, Palaeoclimatology, Palaeoecology, 562 , pp. 110071, 2021, ISSN: 00310182.

Abstract | Links | BibTeX

Pérez-Asensio, José N; Rodríguez-Tovar, Francisco J; Łaska, Weronika; Uchman, Alfred

Palaeoenvironmental changes after the Messinian Salinity Crisis in the Mediterranean Almería-Níjar Basin (SE Spain) recorded by benthic foraminifera Journal Article

Palaeogeography, Palaeoclimatology, Palaeoecology, 577 , pp. 110536, 2021, ISSN: 00310182.

Abstract | Links | BibTeX

Madaj, Rafal; Gostynski, Bartlomiej; Pawlowska, Roza; Chworos, Arkadiusz

Tissue-Nonspecific Alkaline Phosphatase (TNAP) as the Enzyme Involved in the Degradation of Nucleotide Analogues in the Ligand Docking and Molecular Dynamics Approaches Journal Article

Biomolecules, 11 , pp. 1104, 2021, ISSN: 2218-273X.

Abstract | Links | BibTeX

Madaj, Rafal; Geoffrey, Ben; Sanker, Akhil; Valluri, Pavan Preetham

Target2DeNovoDrug: a novel programmatic tool for in silico -deep learning based de novo drug design for any target of interest Journal Article

Journal of Biomolecular Structure and Dynamics, pp. 1-6, 2021, ISSN: 0739-1102.

Abstract | Links | BibTeX

Madaj, Rafał; Sroczyński, Witold; Sójka, Michał; Olejnik, Tomasz P; Sobiecka, Elżbieta

Batch Mode Reactor for 3,5-Dinitrosalicylic Acid Degradation by Phanerochaete chrysosporium Journal Article

Processes, 9 , pp. 105, 2021, ISSN: 2227-9717.

Abstract | Links | BibTeX

Madaj, Rafal; Pawlowska, Roza; Chworos, Arkadiusz

In silico exploration of binding of selected bisphosphonate derivatives to placental alkaline phosphatase via docking and molecular dynamics Journal Article

Journal of Molecular Graphics and Modelling, 103 , pp. 107801, 2021, ISSN: 10933263.

Abstract | Links | BibTeX

Szczepaniak, Krzysztof; Bukala, Adriana; da Neto, Antonio Marinho Silva; Ludwiczak, Jan; Dunin-Horkawicz, Stanislaw

A library of coiled-coil domains: from regular bundles to peculiar twists Journal Article

Bioinformatics, 36 , pp. 5368-5376, 2021, ISSN: 1367-4803.

Abstract | Links | BibTeX

Adamczyk, M; Lewicka, E; Szatkowska, R; Nieznanska, H; Ludwiczak, J; Jasiński, M; Dunin-Horkawicz, S; Sitkiewicz, E; Swiderska, B; Goch, G; Jagura-Burdzy, G

Revealing biophysical properties of KfrA-type proteins as a novel class of cytoskeletal, coiled-coil plasmid-encoded proteins Journal Article

BMC Microbiology, 21 , pp. 32, 2021, ISSN: 1471-2180.

Abstract | Links | BibTeX

Zayats, Vasilina; Perlinska, Agata P; Jarmolinska, Aleksandra I; Jastrzebski, Borys; Dunin-Horkawicz, Stanislaw; Sulkowska, Joanna I

Slipknotted and unknotted monovalent cation-proton antiporters evolved from a common ancestor Journal Article

PLOS Computational Biology, 17 , pp. e1009502, 2021, ISSN: 1553-7358.

Abstract | Links | BibTeX

Banaś, Anna M; Bocian-Ostrzycka, Katarzyna M; Dunin-Horkawicz, Stanisław; Ludwiczak, Jan; Wilk, Piotr; Orlikowska, Marta; Wyszyńska, Agnieszka; Dąbrowska, Maria; Plichta, Maciej; Spodzieja, Marta; Polańska, Marta A; Malinowska, Agata; Jagusztyn-Krynicka, Elżbieta Katarzyna

Interplay between DsbA1, DsbA2 and C8J_1298 Periplasmic Oxidoreductases of Campylobacter jejuni and Their Impact on Bacterial Physiology and Pathogenesis Journal Article

International Journal of Molecular Sciences, 22 , pp. 13451, 2021, ISSN: 1422-0067.

Abstract | Links | BibTeX

Jarmuła, Adam; Ludwiczak, Jan; Stępkowski, Dariusz

β‐sheet breakers with consecutive phenylalanines: Insights into mechanism of dissolution of β‐amyloid fibrils Journal Article

Proteins: Structure, Function, and Bioinformatics, 89 , pp. 762-780, 2021, ISSN: 0887-3585.

Abstract | Links | BibTeX

 

2020

Kayama, Motoki; Maciszewski, Kacper; Yabuki, Akinori; Miyashita, Hideaki; Karnkowska, Anna; Kamikawa, Ryoma

Highly reduced plastid genomes of the non-photosynthetic dictyochophyceans Pteridomonas spp. (Ochrophyta, SAR) are retained for tRNA-Glu-based organellar heme biosynthesis. Journal Article

Frontiers in Plant Science, 11 , pp. 1859 , 2020.

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Kolisko, Martin; Flegontova, Olga; Karnkowska, Anna; Lax, Gordon; Maritz, Julia M; Pánek, Tomáš; Táborský, Petr; Carlton, Jane M; Čepička, Ivan; Horák, Aleš; Lukeš, Julius; Simpson, Alastair G B; Tai, Vera

EukRef-excavates: seven curated SSU ribosomal RNA gene databases Journal Article

Database (Oxford), pp. baaa080, 2020.

Links | BibTeX

Põlme, Sergei; Abarenkov, Kessy; Nilsson, Henrik R; Lindahl, Björn D; Clemmensen, Karina Engelbrecht; Kauserud, Havard; Nguyen, Nhu; Kjøller, Rasmus; Bates, Scott T; Baldrian, Petr; Frøslev, Tobias Guldberg; Adojaan, Kristjan; Vizzini, Alfredo; Suija, Ave; Pfister, Donald; Baral, Hans Otto; Järv, Helle; Madrid, Hugo; Nordén, Jenni; Liu, Jian Kui; Pawłowska, Julia; Põldmaa, Kadri; Pärtel, Kadri; Runnel, Kadri; Hansen, Karen; Larsson, Karl Henrik; Hyde, Kevin David; Denis, Marcelo Sandoval; Smith, Matthew E; Heller, Merje Toome; Wijayawardene, Nalin N; Menolli, Nelson; Reynolds, Nicole K; Drenkhan, Rein; Maharachchikumbura, Sajeewa S N; Gibertoni, Tatiana B; Læssøe, Thomas; Davis, William; Tokarev, Yuri; Corrales, Adriana; Soares, Adriene Mayra; Agan, Ahto; Machado, Alexandre Reis; Moyao, Andrés Argüelles; Detheridge, Andrew; de Ottoni, Angelina Meiras; Verbeken, Annemieke; Dutta, Arun Kumar; Cui, Bao Kai; Pradeep, C K; Marín, César; Stanton, Daniel; Gohar, Daniyal; Wanasinghe, Dhanushka N; Otsing, Eveli; Aslani, Farzad; Griffith, Gareth W; Lumbsch, Thorsten H; Grossart, Hans Peter; Masigol, Hossein; Timling, Ina; Hiiesalu, Inga; Oja, Jane; Kupagme, John Y; Geml, József; Manjarrez, Julieta Alvarez; Ilves, Kai; Loit, Kaire; Adamson, Kalev; Nara, Kazuhide; Küngas, Kati; Jimenez, Keilor Rojas; Bitenieks, Krišs; Irinyi, Laszlo; Nagy, László Laszlo; Soonvald, Liina; Zhou, LiWei; Wagner, Lysett; Aime, Catherine M; Öpik, Maarja; Mujica, María Isabel; Metsoja, Martin; Ryberg, Martin; Vasar, Martti; Murata, Masao; Nelsen, Matthew P; Cleary, Michelle; Samarakoon, Milan C; Doilom, Mingkwan; Bahram, Mohammad; Doust, Niloufar Hagh; Dulya, Olesya; Johnston, Peter; Kohout, Petr; Chen, Qian; Tian, Qing; Nandi, Rajasree; Amiri, Rasekh; Perera, Rekhani Hansika; dos Chikowski, Renata Santos; MendesAlvarenga, Renato L; Orijel, Roberto Garibay; Gielen, Robin; Phookamsak, Rungtiwa; Jayawardena, Ruvishika S; Rahimlou, Saleh; Karunarathna, Samantha C; Tibpromma, Saowaluck; Brown, Shawn P; Sepp, Siim Kaarel; Mundra, Sunil; Luo, Zhu Hua; Bose, Tanay; Vahter, Tanel; Netherway, Tarquin; Yang, Teng; May, Tom; Varga, Torda; Li, Wei; Coimbra, Victor Rafael Matos; de Oliveira, Virton Rodrigo Targino; de Lima, Vitor Xavier; Mikryukov, Vladimir S; Lu, Yongzhong; Matsuda, Yosuke; Miyamoto, Yumiko; Kõljalg, Urmas; Tedersoo, Leho

FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles Journal Article

Fungal Diversity, 105 (1), 2020.

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Sulej, Tomasz; Krzesiński, Grzegorz; Tałanda, Mateusz; Wolniewicz, Andrzej S; Błażejowski, Błażej; Bonde, Niels; Gutowski, Piotr; Sienkiewicz, Maksymilian; Niedźwiedzki, Grzegorz

The earliest-known mammaliaform fossil from Greenland sheds light on origin of mammals Journal Article

Proceedings of the National Academy of Sciences, 117 (43), pp. 26861-26867, 2020.

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Bakuła, Zofia; Gromadka, Robert; Gawor, Jan; Siedlecki, Paweł; Pomorski, Jan J; Maciszewski, Kacper; Gromadka, Agnieszka; Karnkowska, Anna; Jagielski, Tomasz

Sequencing and Analysis of the Complete Organellar Genomes of Prototheca wickerhamii Journal Article

Frontiers in Plant Science, 11 , pp. 1296, 2020.

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Frankiewicz, Kamil E; Chau, John H; Oskolski, Alexei A

Wood and bark of Buddleja: uniseriate phellem, and systematic and ecological patterns Journal Article

IAWA Journal, 42 (1), pp. 3–30, 2020, ISBN: 0928-1541.

Abstract | Links | BibTeX

PW, Crous; MJ, Wingfield; YH, Chooi; (...), ; M, Gorczak; et al.,

Fungal Planet description sheets: 1042-1111 Journal Article

Persoonia, 44 , pp. 301-459, 2020.

Abstract | Links | BibTeX

Łukomska-Kowalczyk, Maja; Fells, Alicja; Chaber, Katarzyna; Milanowski, Rafał; Zakryś, Bożena

Taxon‐rich phylogeny and taxonomy of the genus Phacus (Euglenida) based on morphological and molecular data Journal Article

Journal of Phycology, 56 (5), pp. 1135-1156, 2020.

Abstract | Links | BibTeX

Bajer, Anna; Alsarraf, Mohammed; Dwużnik, Dorota; Mierzejewska, Ewa J; Kołodziej-Sobocińska, Marta; Behnke-Borowczyk, Jolanta; Banasiak, Łukasz; Grzybek, Maciej; Tołkacz, Katarzyna; Kartawik, Natalia; Stańczak, Łukasz; Opalińsk, Patrycja; Krokowska-Paluszak, Małgorzata; Górecki, Grzegorz; Alsarraf, Mustafa; Behnke, Jerzy M

Rodents as intermediate hosts of cestode parasites of mammalian carnivores and birds of prey in Poland, with the first data on the life-cycle of Mesocestoides melesi Journal Article

Parasites & Vectors, 13 (1), pp. 95, 2020.

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Keeling, Patrick J; Boscaro, Vittorio; Bardell, Floyd; Burki, Fabien; Cho, Anna; Cooney, Elizabeth C; del Campo, Javier; Fast, Naomi M; Fiorito, Rebecca; Gavelis, Greg S; Gawryluk, Ryan M R; George, Emma E; Gomm-Kolisko, Rachael N; Grisdale, Cameron J; Heger, Thierry; Hehenberger, Elisabeth; Herranz, Maria; Hirakawa, Yoshihisa; Husnik, Filip; Imanian, Behzad; Irwin, Nicholas A T; James, Erick R; Janouskovec, Jan; Karnkowska, Anna; Kolisko, Martin; Kwong, Waldan; Leander, Brian S; Mathur, Varsha; Nawar, Ferdous; Okamoto, Noriko; Parfrey, Laura; Pittis, Alexandros; Pan, Jingwen; Pombert, Jean-Francois; Sabetrasekh, Mona; Saldarriaga, Juan F; Sanders, Rhea; Singh, Racquel A; Smith, David R; Strassert, Jürgen F H; Stephenson, India; Syberg-Olsen, Mitchell J; Tai, Vera; Tikhonenkov, Denis V; Van Steenkiste, Niels W L; Whalen, Matthew; Whelan, Thomas A; Wong, Donald K

A letter to Denis Lynn Journal Article

Aquatic Ecosystem Health & Management, 23 (1), pp. 17–18, 2020, ISSN: 1463-4988.

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Frankiewicz, Kamil E; Oskolski, Alexei; Banasiak, Łukasz; Fernandes, Francisco; Reduron, Jean-Pierre; Reyes-Betancort, Jorge-Alfredo; Szczeparska, Liliana; Alsarraf, Mohammed; Baczyński, Jakub; Spalik, Krzysztof

Parallel evolution of arborescent carrots (Daucus) in Macaronesia Journal Article

American Journal of Botany, 107 (3), pp. 394-412, 2020.

Abstract | Links | BibTeX

Sulej, Tomasz; Niedźwiedzki, Grzegorz; Tałanda, Mateusz; Dróżdż, Dawid; Hara, Ewa

A new early Late Triassic non-mammaliaform eucynodont from Poland Journal Article

Historical Biology, 32 (1), pp. 80-92, 2020.

Abstract | Links | BibTeX

Świś, Przemysław; Broda, Krzysztof; Duda, Piotr; Dróżdż, Dawid; Łazuka, Anna

The early Famennian (Late Devonian) conodonts natural assemblages from Holy Cross Mountains (Poland) Journal Article

Historical Biology, 0 (0), pp. 1-8, 2020.

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Piechowski, Rafał; Tałanda, Mateusz

The locomotor musculature and posture of the early dinosauriform Silesaurus opolensis provides a new look into the evolution of Dinosauromorpha Journal Article

Journal of Anatomy, 236 (6), pp. 1044-1100, 2020.

Abstract | Links | BibTeX

Łukomska-Kowalczyk, Maja; Chaber, Katarzyna; Fells, Alicja; Milanowski, Rafał; Zakryś, Bożena

Molecular and Morphological Delimitation of Species in the Group of Lepocinclis Ovum-like taxa (Euglenida) Journal Article

Journal of Phycology, 56 (2), pp. 283-299, 2020.

Abstract | Links | BibTeX

Haelewaters, Danny; Okrasińska, Alicja; Gorczak, Michał; Pfister, Donald H

Draft Genome Sequence of the Globally Distributed Cockroach-Infecting Fungus Herpomyces periplanetae Strain D. Haelew. 1187d Journal Article

Microbiology Resource Announcements, 9 (6), 2020.

Abstract | Links | BibTeX

Lukešová, Soňa; Karlicki, Michał; Hadariová, Lucia Tomečková; Szabová, Jana; Karnkowska, Anna; Hampl, Vladimír

Analyses of environmental sequences and two regions of chloroplast genomes revealed the presence of new clades of photosynthetic euglenids in marine environments Journal Article

Environmental Microbiology Reports, 12 (1), pp. 78-91, 2020.

Abstract | Links | BibTeX

Wijayawardene, N N; Hyde, K D; Al-Ani, L K T; Tedersoo, L; Haelewaters, Danny; Rajeshkumar, K C; Zhao, R L; Aptroot, A; D., Leontyev V; Saxena, R K; Tokarev, Y S; Dai, D Q; Letcher, P M; Stephenson, S L; Ertz, D; Lumbsch, H T; Kukwa, M; I., Issi V; Madrid, H; Phillips, A J L; Selbmann, L; Pfliegler, W P; Horvath, E; Bensch, K; Kirk, P M; Kolarikova, K; Raja, H A; Radek, R; Papp, V; Dima, B; Ma, J; Malosso, E; Takamatsu, S; Rambold, G; Gannibal, P B; Triebel, D; Gautam, A K; Avasthi, S; Suetrong, S; Timdal, E; Fryar, S C; Delgado, G; Reblova, M; Doilom, M; Dolatabadi, S; Pawłowska, Julia Z; Humber, R A; Kodsueb, R; Sanchez-Castro, I; Goto, B T; Silva, D K A; de Souza, F A; Oehl, F R; da Silva, G A; Silva, I R; Blaszkowski, J; Jobim, K; Maia, L C; Barbosa, F R; Fiuza, P O; Divakar, P K; Shenoy, B D; Castaneda-Ruiz, R F; Somrithipol, S; Lateef, A A; Karunarathna, S C; Tibpromma, S; Mortimer, P E; Wanasinghe, D N; Phookamsak, R; Xu, J; Wang, Y; Tian, F; Alvarado, P; Li, D W; Kusan, I; Matocec, N; Masic, A; Tkalcec, Z; Maharachchikumbura, S S N; Papizadeh, M; Heredia, G; Wartchow, F; Bakhshi, M; Boehm, E; Youssef, N; Hustad, V P; Lawrey, J D; Santiago, A L C M A; Bezerra, J D P; Souza-Motta, C M; Firmino, A L; Tian, Q; Houbraken, J; Hongsanan, S; Tanaka, K; Dissanayake, A J; Monteiro, J S; Grossart, H P; Suija, A; Weerakoon, G; Etayo, J; Tsurykau, A; Vazquez, V; Mungai, P; Damm, U; Li, Q R; Zhang, H; Boonmee, S; Lu, Y Z; Becerra, A G; Kendrick, B; Brearley, F Q; Motiejunaite, J; Sharma, B; Khare, R; Gaikwad, S; Wijesundara, D S A; Tang, L Z; He, M Q; Flakus, A; Rodriguez-Flakus, P; Zhurbenko, M P; McKenzie, E H C; Stadler, M; Bhat, D J; Liu, J K; Raza, M; Jeewon, R; Nassonova, E S; Prieto, M; Jayalal, R G U; Erdogdu, M; Yurkov, A; Schnittler, M; Shchepin, O N; Novozhilov, Y K; Silva-Filho, A G S; Gentekaki, E; Liu, P; Cavender, J C; Kang, Y; Mohammad, S; Zhang, L F; Xu, R F; Li, Y M; Dayarathne, M C; Ekanayaka, A H; Wen, T C; Deng, C Y; Pereira, O L; Navathe, S; Hawksworth, D L; Fan, X L; Dissanayake, L S; Kuhnert, E; Thines, M

Outline of Fungi and fungus-like taxa Journal Article

Mycosphere, 11 (1), pp. 1060–1456, 2020, ISSN: 2077-7000.

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Czepiński, Łukasz

New protoceratopsid specimens improve the age correlation of the Upper Cretaceous Gobi Desert strata Journal Article

Acta Palaeontologica Polonica, 65 , 2020.

BibTeX

Pindakiewicz, Maciej; Tałanda, Mateusz; Sulej, Tomasz; Niedźwiedzki, Grzegorz; Sennikov, A G; Bakayev, A; Bulanov, V V; Golubev, V; Minikh, A V

Feeding convergence among ray-finned fishes: teeth of the herbivorous actinopterygians from the latest Permian of East European Platform, Russia Journal Article

Acta Palaeontologica Polonica, 65 (1), pp. 71–79, 2020.

BibTeX

Pawlak, Wojciech; Tałanda, Mateusz; Sulej, Tomasz; Niedźwiedzki, Grzegorz

Dipnoan from the Upper Triassic of East Greenland and remarks about palaeobiogeography of Ptychoceratodus Journal Article

Acta Palaeontologica Polonica, 65 , pp. 561-574, 2020.

BibTeX

Selig, Keegan R; Lopez-Torres, Sergi; Hartstone-Rose, Adam; Nash, Leanne T; Burrows, Anne M; Silcox, Mary T

A novel method for assessing enamel thickness distribution in the anterior dentition as a signal for gouging and other extractive foraging behaviors in gummivorous mammals Journal Article

Folia Primatologica, 91 (4), pp. 365-384, 2020.

BibTeX

Lopez-Torres, Sergi; Bertrand, Ornella C; Lang, Madlen M; Silcox, Mary T; Fostowicz-Frelik, Lucja

Cranial endocast of the stem lagomorph Megalagus and brain structure of basal Euarchontoglires Journal Article

Proceedings of the Royal Society B, 287 (1929), pp. 20200665, 2020.

BibTeX

Burrows, Anne M; Nash, Leanne T; Hartstone-Rose, Adam; Silcox, Mary T; Lopez-Torres, Sergi; Selig, Keegan R

Dental signatures for exudativory in living primates, with comparisons to other gouging mammals Journal Article

The Anatomical Record, 303 (2), pp. 265-281, 2020.

BibTeX

López-Torres, Sergi; Selig, Keegan R; Burrows, Anne M; Silcox, Mary T

The Toothcomb of Karanisia clarki: Was this Species an Exudate-feeder? Book Chapter

Nekaris, K A I; Burrows, Anne M.Editors (Ed.): Evolution, Ecology and Conservation of Lorises and Pottos, pp. 67–75, Cambridge University Press, 2020.

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López-Torres, Sergi; Silcox, Mary T

What We Know (and Don’t Know) About the Fossil Records of Lorisids Book Chapter

Nekaris, K A I; Burrows, Anne M.Editors (Ed.): Evolution, Ecology and Conservation of Lorises and Pottos, pp. 33–46, Cambridge University Press, 2020.

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Kovač, Marta; Gorczak, Michał; Wrzosek, Marta; Tkaczuk, Cezary; Pernek, Milan

Identification of Entomopathogenic Fungi as Naturally Occurring Enemies of the Invasive Oak Lace Bug, Corythucha arcuata (Say) (Hemiptera: Tingidae) Journal Article

Insects, 11 (10), 2020, ISSN: 2075-4450.

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Jarochowska, E; Nohl, T; Grohganz, M; Hohmann, N; Vandenbroucke, T R A; Munnecke, A

Reconstructing Depositional Rates and Their Effect on Paleoenvironmental Proxies: The Case of the Lau Carbon Isotope Excursion in Gotland, Sweden Journal Article

Paleoceanography and Paleoclimatology, 35 (12), pp. e2020PA003979, 2020, (e2020PA003979 2020PA003979).

Abstract | Links | BibTeX

Siuda, Waldemar; Grabowska, Karolina; Kaliński, Tomasz; Kiersztyn, Bartosz; Chróst, Ryszard J

Trophic state, eutrophication, and the threats for water quality of the great mazurian lake system Journal Article

Handbook of Environmental Chemistry, 86 , pp. 231-260, 2020, ISSN: 1867979X.

Abstract | Links | BibTeX

Geoffrey, Ben; Sanker, Akhil; Madaj, Rafal; Tresanco, Mario Sergio Valdés; Upadhyay, Manish; Gracia, Judith

A program to automate the discovery of drugs for West Nile and Dengue virus—programmatic screening of over a billion compounds on PubChem, generation of drug leads and automated in silico modelling Journal Article

Journal of Biomolecular Structure and Dynamics, pp. 1-9, 2020, ISSN: 0739-1102.

Abstract | Links | BibTeX

Burmistrz, Michal; Krakowski, Kamil; Krawczyk-Balska, Agata

RNA-Targeting CRISPR–Cas Systems and Their Applications Journal Article

International Journal of Molecular Sciences, 21 , pp. 1122, 2020, ISSN: 1422-0067.

Abstract | Links | BibTeX

Banaś, Anna Marta; Bocian-Ostrzycka, Katarzyna Marta; Plichta, Maciej; Dunin-Horkawicz, Stanisław; Ludwiczak, Jan; Płaczkiewicz, Jagoda; Jagusztyn-Krynicka, Elżbieta Katarzyna

C8J_1298, a bifunctional thiol oxidoreductase of Campylobacter jejuni, affects Dsb (disulfide bond) network functioning Journal Article

PLOS ONE, 15 , pp. e0230366, 2020, ISSN: 1932-6203.

Abstract | Links | BibTeX

Czepiński, Łukasz

Ontogeny and variation of a protoceratopsid dinosaur Bagaceratops rozhdestvenskyi from the Late Cretaceous of the Gobi Desert Journal Article

Historical Biology, 32 (10), pp. 1394–1421, 2020.

Abstract | Links | BibTeX

Świś, Przemysław; Dzik, Jerzy

The oral apparatus composition of the Early Carboniferous elictognathid conodont 'Siphonodella' Journal Article

Lethaia, 2020, (Publisher: Wiley).

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Dzik, Jerzy

Decline in diversity of early Palaeozoic loosely coiled gastropod protoconchs Journal Article

Lethaia, 53 (1), pp. 32–46, 2020.

BibTeX

Dzik, Jerzy

Ewolucja. Twórcza moc selekcji Book

Wydawnictwa Uniwersytetu Warszawskiego, Warszawa, 2020, ISBN: 978-83-235-4105-9, (Publication Title: Wydawnictwa Uniwersytetu Warszawskiego).

BibTeX

Dzik, Jerzy

Ordovician conodonts and the Tornquist Lineament Journal Article

Palaeogeography, Palaeoclimatology, Palaeoecology, 549 , 2020.

BibTeX

Dzik, Jerzy

Variability of conch morphology in a cephalopod species from the Cambrian to Ordovician transition strata of Siberia Journal Article

Acta Palaeontologica Polonica, 65 , pp. 149–165, 2020, (Publisher: Polska Akademia Nauk Instytut Paleobiologii (Institute of Paleobiology, Polish Academy of Sciences)).

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2019

Haelewaters, Danny; Kesel, André De; Gorczak, Michał; Bao, Kevin; Gort, Gerrit; Zhao, Serena Y; Pfister, Donald H

Laboulbeniales (Ascomycota) of the Boston Harbor Islands II (and Other Localities): Species Parasitizing Carabidae, and the Laboulbenia flagellata Species Complex Journal Article

Northeastern Naturalist, 25 (sp9), pp. 110–149, 2019, ISSN: 1092-6194.

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Tischer, Marta; Gorczak, Michał; Bojarski, Błażej; Pawłowska, Julia; Hoffeins, Christel; Hoffeins, Hans Werner; Wrzosek, Marta

New fossils of ascomycetous anamorphic fungi from Baltic amber Journal Article

Fungal Biology, 123 (11), pp. 804–810, 2019, ISSN: 1878-6146.

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Pawłowska, Julia; Okrasińska, Alicja; Kisło, Kamil; Aleksandrzak-Piekarczyk, Tamara; Szatraj, Katarzyna; Dolatabadi, Somayeh; Muszewska, Anna

Carbon assimilation profiles of mucoralean fungi show their metabolic versatility Journal Article

Scientific Reports, 9 , pp. 11864, 2019.

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Grond, Joost; Płecha, Magdalena; Hahn, Christoph; Wiig, Øystein; Bachmann, Lutz

Mitochondrial genomes of ancient bowhead whales (Balaena mysticetus) from Svalbard Journal Article

Mitochondrial DNA Part B, 4 (2), pp. 4152–4154, 2019, ISSN: 2380-2359.

Abstract | Links | BibTeX

PW, Crous; AJ, Carnegie; MJ, Wingfield; R, Sharma; G, Mughini; ME, Noordeloos; A, Santini; YS, Shouche; JDP, Bezerra; B, Dima; V, Guarnaccia; I, Imrefi; Ž, Jurjević; DG, Knapp; GM, Kovács; D, Magistà; G, Perrone; T, Rämä; YA, Rebriev; RG, Shivas; SM, Singh; CM, Souza-Motta; R, Thangavel; NN, Adhapure; AV, Alexandrova; AC, Alfenas; RF, Alfenas; P, Alvarado; AL, Alves; DA, Andrade; JP, Andrade; RN, Barbosa; A, Barili; CW, Barnes; IG, Baseia; JM, Bellanger; C, Berlanas; AE, Bessette; AR, Bessette; AY, Biketova; FS, Bomfim; TE, Brandrud; K, Bransgrove; ACQ, Brito; JF, Cano-Lira; T, Cantillo; AD, Cavalcanti; R, Cheewangkoon; RS, Chikowski; C, Conforto; TRL, Cordeiro; JD, Craine; R, Cruz; U, Damm; de RJV, Oliveira; de JT, Souza; de HG, Souza; JDW, Dearnaley; RA, Dimitrov; F, Dovana; A, Erhard; F, Esteve-Raventós; CR, Félix; G, Ferisin; RA, Fernandes; RJ, Ferreira; LO, Ferro; CN, Figueiredo; JL, Frank; KTLS, Freire; D, García; J, Gené; A, Gêsiorska; TB, Gibertoni; RAG, Gondra; DE, Gouliamova; D, Gramaje; F, Guard; LFP, Gusmão; S, Haitook; Y, Hirooka; J, Houbraken; V, Hubka; A, Inamdar; T, Iturriaga; I, Iturrieta-González; M, Jadan; N, Jiang; A, Justo; AV, Kachalkin; VI, Kapitonov; M, Karadelev; J, Karakehian; T, Kasuya; I, Kautmanová; J, Kruse; I, Kušan; TA, Kuznetsova; MF, Landell; KH, Larsson; HB, Lee; DX, Lima; CRS, Lira; AR, Machado; H, Madrid; OMC, Magalhães; H, Majerova; EF, Malysheva; RR, Mapperson; PAS, Marbach; MP, Martín; A, Martín-Sanz; N, Matočec; AR, McTaggart; JF, Mello; RFR, Melo; A, Mešić; SJ, Michereff; AN, Miller; A, Minoshima; L, Molinero-Ruiz; OV, Morozova; D, Mosoh; M, Nabe; R, Naik; K, Nara; SS, Nascimento; RP, Neves; I, Olariaga; RL, Oliveira; TGL, Oliveira; T, Ono; ME, Ordoñez; AM, Ottoni; LM, Paiva; F, Pancorbo; B, Pant; J, Pawłowska; SW, Peterson; DB, Raudabaugh; E, Rodríguez-Andrade; E, Rubio; K, Rusevska; ALCMA, Santiago; ACS, Santos; C, Santos; NA, Sazanova; S, Shah; J, Sharma; BDB, Silva; JL, Siquier; MS, Sonawane; AM, Stchigel; T, Svetasheva; N, Tamakeaw; MT, Telleria; PV, Tiago; CM, Tian; Z, Tkalčec; MA, Tomashevskaya; HH, Truong; MV, Vecherskii; CM, Visagie; A, Vizzini; N, Yilmaz; IV, Zmitrovich; EA, Zvyagina; T, Boekhout; T, Kehlet; T, Læssøe; JZ., Groenewald

Fungal Planet description sheets: 868-950 Journal Article

Persoonia, 42 , pp. 291, 2019.

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Płecha, Magdalena; Panagiotopoulou, Hanna; Popović, Danijela; Michalska-Parda, Aleksandra; Gromadka, Robert; Węgleński, Piotr; Stanković, Anna

Microsatellite multiplexes for the genetic analyses of northern pike (Esox lucius) populations Journal Article

Fisheries & Aquatic Life, 27 (1), pp. 33–40, 2019, ISSN: 2545-059X.

Abstract | Links | BibTeX

Uhlik, Marcin Edward

Evolutionary significance of the embryological development of the daphniid cladocerans Ceriodaphnia Dana, 1853 and Scapholeberis Schoedler, 1858 (Branchiopoda: Cladocera: Daphniidae) Journal Article

Journal of Crustacean Biology, 40 (1), pp. 37-44, 2019, ISSN: 0278-0372.

Abstract | Links | BibTeX

Świś, Przemysław

Population dynamics of the Late Devonian conodont Alternognathus calibrated in days Journal Article

Historical Biology, 31 (9), pp. 1161-1169, 2019.

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Pawłowska, Julia; Frąc, Magdalena; Kałucka, Izabela; Ruszkiewicz-Michalska, Małgorzata; Różalska, Sylwia; Wrzosek, Marta

The XVIII Congress of European Mycologists: Conference Report Journal Article

Journal of Fungi, 5 (4), 2019, ISSN: 2309-608X.

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Ignatenko, Antonina; Gumińska, Natalia; Milanowski, Rafał

Mechanizmy utraty i nabywania intronów spliceosomalnych Journal Article

Postepy biochemii, 65 (4), pp. 289–298, 2019, ISSN: 00325422.

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Adl, Sina M; Bass, David; Lane, Christopher E; Lukeš, Julius; Schoch, Conrad L; Smirnov, Alexey; Agatha, Sabine; Berney, Cedric; Brown, Matthew W; Burki, Fabien; Cárdenas, Paco; č, Ivan {Č}epi; Chistyakova, Lyudmila; Campo, Javier; Dunthorn, Micah; Edvardsen, Bente; Eglit, Yana; Guillou, Laure; Hampl, Vladimír; Heiss, Aaron A; Hoppenrath, Mona; James, Timothy Y; Karnkowska, Anna; Karpov, Sergey; Kim, Eunsoo; Kolisko, Martin; Kudryavtsev, Alexander; Lahr, Daniel J G; Lara, Enrique; Le Gall, Line ; Lynn, Denis H; Mann, David G; Massana, Ramon; Mitchell, Edward A D; Morrow, Christine; Park, Jong Soo; Pawlowski, Jan W; Powell, Martha J; Richter, Daniel J; Rueckert, Sonja; Shadwick, Lora; Shimano, Satoshi; Spiegel, Frederick W; Torruella, Guifré; Youssef, Noha; Zlatogursky, Vasily; Zhang, Qianqian

Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Journal Article

Journal of Eukaryotic Microbiology, 66 (1), pp. 4–119, 2019, ISSN: 1066-5234.

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Banasiak, Łukasz; Pietras, Marcin; Wrzosek, Marta; Okrasińska, Alicja; Gorczak, Michał; Kolanowska, Marta; Pawłowska, Julia

Aureoboletus projectellus (Fungi, Boletales) – An American bolete rapidly spreading in Europe as a new model species for studying expansion of macrofungi Journal Article

Fungal Ecology, 39 , pp. 94 - 99, 2019, ISSN: 1754-5048.

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Selig, Keegan R; Lopez-Torres, Sergi; Sargis, Eric J; Silcox, Mary T

First 3D dental topographic analysis of the enamel-dentine junction in non-primate euarchontans: Contribution of the enamel-dentine junction to molar morphology Journal Article

Journal of Mammalian Evolution, 26 (4), pp. 587-598, 2019.

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Haelewaters, Danny; Pfliegler, Walter P; Gorczak, Michał; Pfister, Donald H

Birth of an order: Comprehensive molecular phylogenetic study excludes Herpomyces (Fungi, Laboulbeniomycetes) from Laboulbeniales Journal Article

Molecular Phylogenetics and Evolution, 133 , pp. 286 - 301, 2019, ISSN: 1055-7903.

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Hohmann, Niklas; Jarochowska, Emilia

Enforced symmetry: the necessity of symmetric waxing and waning Journal Article

PeerJ, 7 , pp. e8011, 2019, ISSN: 2167-8359.

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Łaska, Weronika; Rodríguez-Tovar, Francisco J; Uchman, Alfred; Aguirre, J

Ecological snapshot of a population of Panopea within their traces (Pliocene, Agua Amarga subbasin, SE Spain) Journal Article

Palaeogeography, Palaeoclimatology, Palaeoecology, 534 , pp. 109296, 2019, ISSN: 00310182.

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Dolatabadi, Somayeh; Rezaei-Matehkolaei, Ali; Pawlowska, Julia; Hosseini, Seyyed Abolfazl; Najafzadeh, Mohammad Javad; Madrid, Hugo

Chaetothyrialean fungi from aromatic hydrocarbon-polluted environments of Iran Journal Article

Nova Hedwigia, 108 (3-4), pp. 405-426, 2019.

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Grabowska, Karolina; Bukowska, Aleksandra; Kaliński, Tomasz; Kiersztyn, Bartosz; Siuda, Waldemar; Chróst, Ryszard J

Presence and identification of Legionella and Aeromonas spp. in the Great Masurian Lakes system in the context of eutrophication Journal Article

Journal of Limnology, 2019, ISSN: 1129-5767.

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Kiersztyn, Bartosz; Chróst, Ryszard; Kaliński, Tomasz; Siuda, Waldemar; Bukowska, Aleksandra; Kowalczyk, Grzegorz; Grabowska, Karolina

Structural and functional microbial diversity along a eutrophication gradient of interconnected lakes undergoing anthropopressure Journal Article

Scientific Reports, 9 , 2019, ISSN: 2045-2322.

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Wojewódzka, Aneta; Baczyński, Jakub; Banasiak, Łukasz; Downie, Stephen R; Czarnocka-Cieciura, Agnieszka; Gierek, Michał; Frankiewicz, Kamil; Spalik, Krzysztof

Evolutionary shifts in fruit dispersal syndromes in Apiaceae tribe Scandiceae Journal Article

Plant Systematics and Evolution, 305 (5), pp. 401–414, 2019, ISSN: 0378-2697, 2199-6881.

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Spalik, Krzysztof; Wojewódzka, Aneta; Constantinidis, Theophanis; Downie, Stephen R; Gierek, Michał; Banasiak, Łukasz

Laserocarpum, a new genus of Apiaceae endemic to Greece Journal Article

Acta Soc Bot Pol, pp. 9, 2019.

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Ludwiczak, Jan; Winski, Aleksander; Szczepaniak, Krzysztof; Alva, Vikram; Dunin-Horkawicz, Stanislaw

DeepCoil—a fast and accurate prediction of coiled-coil domains in protein sequences Journal Article

Bioinformatics, 35 , pp. 2790-2795, 2019, ISSN: 1367-4803.

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Nowacka, Martyna; Boccaletto, Pietro; Jankowska, Elzbieta; Jarzynka, Tomasz; Bujnicki, Janusz M; Dunin-Horkawicz, Stanislaw

RRMdb—an evolutionary-oriented database of RNA recognition motif sequences Journal Article

Database, 2019 , 2019, ISSN: 1758-0463.

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Ludwiczak, Jan; Szczęsna, Ewa; da Neto, Antônio Marinho Silva; Cieplak, Piotr; Kasprzak, Andrzej A; Jarmuła, Adam

Interactions between motor domains in kinesin-14 Ncd — a molecular dynamics study Journal Article

Biochemical Journal, 476 , pp. 2449-2462, 2019, ISSN: 0264-6021.

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Ludwiczak, Jan; Winski, Aleksander; da Neto, Antonio Marinho Silva; Szczepaniak, Krzysztof; Alva, Vikram; Dunin-Horkawicz, Stanislaw

PiPred – a deep-learning method for prediction of π-helices in protein sequences Journal Article

Scientific Reports, 9 , pp. 6888, 2019, ISSN: 2045-2322.

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Qvarnström, Martin; Wernström, Joel Vikberg; Piechowski, Rafał; Tałanda, Mateusz; Ahlberg, Per E; Niedźwiedzki, Grzegorz

Beetle-bearing coprolites possibly reveal the diet of a Late Triassic dinosauriform Journal Article

Royal Society Open Science, 6 (3), pp. 181042, 2019, (Publisher: The Royal Society).

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Piechowski, Rafał; Niedźwiedzki, Grzegorz; Tałanda, Mateusz

Unexpected bird-like features and high intraspecific variation in the braincase of the Triassic relative of dinosaurs Journal Article

Historical Biology, 31 (8), pp. 1065–1081, 2019, (Publisher: Taylor & Francis _eprint: https://doi.org/10.1080/08912963.2017.1418339).

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Grzybowski, Marcin; Adamczyk, Józef; Jończyk, Maciej; Sobkowiak, Alicja; Szczepanik, Jarosław; Frankiewicz, Kamil; Fronk, Jan; Sowiński, Paweł

Increased photosensitivity at early growth as a possible mechanism of maize adaptation to cold springs Journal Article

Journal of Experimental Botany, 70 (10), pp. 2887-2904, 2019, ISSN: 0022-0957.

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Maciszewski, Kacper; Karnkowska, Anna

Should I stay or should I go? Retention and loss of components in vestigial endosymbiotic organelles Journal Article

Current Opinion in Genetics & Development, 58-59 , pp. 33-39, 2019, ISSN: 0959-437X, (Evolutionary genetics).

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Han, Kwi Young; Maciszewski, Kacper; Graf, Louis; Yang, Ji Hyun; Andersen, Robert A; Karnkowska, Anna; Yoon, Hwan Su

Dictyochophyceae Plastid Genomes Reveal Unusual Variability in Their Organization Journal Article

Journal of Phycology, 55 (5), pp. 1166-1180, 2019.

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Karnkowska, Anna; Treitli, Sebastian C; Brzoň, Ondřej; Novák, Lukáš; Vacek, Vojtěch; Soukal, Petr; Barlow, Lael D; Herman, Emily K; Pipaliya, Shweta V; Pánek, Tomáš; Žihala, David; Petrželková, Romana; Butenko, Anzhelika; Eme, Laura; Stairs, Courtney W; Roger, Andrew J; Eliáš, Marek; Dacks, Joel B; Hampl, Vladimír

The Oxymonad Genome Displays Canonical Eukaryotic Complexity in the Absence of a Mitochondrion Journal Article

Molecular Biology and Evolution, 36 (10), pp. 2292-2312, 2019, ISSN: 0737-4038.

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Jagielski, Tomasz; Bakuła, Zofia; Gawor, Jan; Maciszewski, Kacper; Kusber, Wolf-Henning; Dyląg, Mariusz; Nowakowska, Julita; Gromadka, Robert; Karnkowska, Anna

The genus Prototheca (Trebouxiophyceae, Chlorophyta) revisited: Implications from molecular taxonomic studies Journal Article

Algal Research, 43 , pp. 101639, 2019, ISSN: 2211-9264.

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Pawlak, Wojciech; Czepiński, Łukasz; Majchrzyk, Aleksander; Duk, Katarzyna

Przegląd skamieniałości krcegowców i flory z terenów dzisiejszej Polski zgromadzonych w Muzeum Historii Naturalnej w Wiedniu Journal Article

Przegląd Geologiczny, 67 (1), pp. 48, 2019, ISSN: 0033-2151.

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